Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Gm37179-201ENSMUST00000194862 823 ntBASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rprd1aQ8VDS4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rprd1aQ8VDS4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rprd1aQ8VDS4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.35■□□□□ 0.69
Rprd1aQ8VDS4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.34■□□□□ 0.69
Rprd1aQ8VDS4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Rprd1aQ8VDS4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rprd1aQ8VDS4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rprd1aQ8VDS4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.32■□□□□ 0.68
Rprd1aQ8VDS4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rprd1aQ8VDS4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms