Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Gm29257-201ENSMUST00000186115 639 ntBASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tm6sf2Q8R1J1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tm6sf2Q8R1J1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tm6sf2Q8R1J1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tm6sf2Q8R1J1 Golph3-202ENSMUST00000226517 2359 ntBASIC17.71■□□□□ 0.42
Tm6sf2Q8R1J1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tm6sf2Q8R1J1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tm6sf2Q8R1J1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tm6sf2Q8R1J1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tm6sf2Q8R1J1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.66■□□□□ 0.42
Tm6sf2Q8R1J1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms