Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim2Q8R1G6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim2Q8R1G6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Gm7332-201ENSMUST00000118351 454 ntBASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim2Q8R1G6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim2Q8R1G6 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim2Q8R1G6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim2Q8R1G6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim2Q8R1G6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim2Q8R1G6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim2Q8R1G6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim2Q8R1G6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Pdlim2Q8R1G6 Cap2-205ENSMUST00000225824 1634 ntBASIC21.77■■□□□ 1.07
Pdlim2Q8R1G6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim2Q8R1G6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Gm43530-201ENSMUST00000195920 274 ntBASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim2Q8R1G6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim2Q8R1G6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 Gm8969-201ENSMUST00000199694 526 ntBASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.73■■□□□ 1.07
Pdlim2Q8R1G6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim2Q8R1G6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim2Q8R1G6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim2Q8R1G6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim2Q8R1G6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms