Protein–RNA interactions for Protein: Q8CI15

Sphk1, Sphingosine kinase 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sphk1Q8CI15 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sphk1Q8CI15 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sphk1Q8CI15 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sphk1Q8CI15 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sphk1Q8CI15 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Gm26524-201ENSMUST00000192339 390 ntBASIC18.81■□□□□ 0.6
Sphk1Q8CI15 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sphk1Q8CI15 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.8■□□□□ 0.6
Sphk1Q8CI15 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sphk1Q8CI15 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Rab3c-203ENSMUST00000224180 967 ntBASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sphk1Q8CI15 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sphk1Q8CI15 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
Sphk1Q8CI15 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sphk1Q8CI15 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Gm22240-201ENSMUST00000175225 82 ntBASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Gm8520-201ENSMUST00000186517 868 ntBASIC18.75■□□□□ 0.59
Sphk1Q8CI15 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sphk1Q8CI15 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sphk1Q8CI15 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sphk1Q8CI15 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.74■□□□□ 0.59
Sphk1Q8CI15 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms