Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.84■□□□□ 0.29
ShfQ8CG80 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.84■□□□□ 0.29
ShfQ8CG80 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Gm7860-201ENSMUST00000121190 879 ntBASIC16.84■□□□□ 0.29
ShfQ8CG80 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.84■□□□□ 0.29
ShfQ8CG80 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ShfQ8CG80 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ShfQ8CG80 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShfQ8CG80 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShfQ8CG80 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ShfQ8CG80 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
ShfQ8CG80 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShfQ8CG80 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShfQ8CG80 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ShfQ8CG80 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ShfQ8CG80 Smad6-203ENSMUST00000179458 273 ntBASIC16.82■□□□□ 0.28
ShfQ8CG80 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.82■□□□□ 0.28
ShfQ8CG80 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ShfQ8CG80 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ShfQ8CG80 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShfQ8CG80 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.81■□□□□ 0.28
ShfQ8CG80 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ShfQ8CG80 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.81■□□□□ 0.28
ShfQ8CG80 Gm11421-201ENSMUST00000122124 294 ntBASIC16.81■□□□□ 0.28
ShfQ8CG80 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.81■□□□□ 0.28
ShfQ8CG80 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShfQ8CG80 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ShfQ8CG80 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.8■□□□□ 0.28
ShfQ8CG80 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.8■□□□□ 0.28
ShfQ8CG80 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.8■□□□□ 0.28
ShfQ8CG80 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ShfQ8CG80 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.8■□□□□ 0.28
ShfQ8CG80 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.8■□□□□ 0.28
ShfQ8CG80 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.8■□□□□ 0.28
ShfQ8CG80 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ShfQ8CG80 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShfQ8CG80 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ShfQ8CG80 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.79■□□□□ 0.28
ShfQ8CG80 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms