Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Chd9Q8BYH8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.03■□□□□ -0
Chd9Q8BYH8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chd9Q8BYH8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chd9Q8BYH8 Gm7153-201ENSMUST00000117092 455 ntBASIC15.03■□□□□ -0
Chd9Q8BYH8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd9Q8BYH8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd9Q8BYH8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Chd9Q8BYH8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chd9Q8BYH8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.02■□□□□ -0
Chd9Q8BYH8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chd9Q8BYH8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chd9Q8BYH8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd9Q8BYH8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.02■□□□□ -0
Chd9Q8BYH8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chd9Q8BYH8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd9Q8BYH8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Gm7284-201ENSMUST00000131667 944 ntBASIC15□□□□□ -0.01
Chd9Q8BYH8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chd9Q8BYH8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15□□□□□ -0.01
Chd9Q8BYH8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15□□□□□ -0.01
Chd9Q8BYH8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chd9Q8BYH8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd9Q8BYH8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Gm7889-201ENSMUST00000185591 958 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd9Q8BYH8 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.99□□□□□ -0.01
Chd9Q8BYH8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Gm30025-201ENSMUST00000218555 728 ntBASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd9Q8BYH8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd9Q8BYH8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd9Q8BYH8 Gm43438-201ENSMUST00000198133 379 ntBASIC14.97□□□□□ -0.01
Chd9Q8BYH8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms