Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trnp1Q80ZI1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Trnp1Q80ZI1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gm43799-201ENSMUST00000201845 579 ntBASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.51■■□□□ 1.03
Trnp1Q80ZI1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.5■■□□□ 1.03
Trnp1Q80ZI1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Gm5417-201ENSMUST00000079706 384 ntBASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trnp1Q80ZI1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trnp1Q80ZI1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trnp1Q80ZI1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trnp1Q80ZI1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trnp1Q80ZI1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Trnp1Q80ZI1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Gm11927-201ENSMUST00000118472 759 ntBASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Flg-201ENSMUST00000050758 1488 ntBASIC21.45■■□□□ 1.02
Trnp1Q80ZI1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trnp1Q80ZI1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms