Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh8Q7TSK3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh8Q7TSK3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh8Q7TSK3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh8Q7TSK3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh8Q7TSK3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh8Q7TSK3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh8Q7TSK3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Gm5408-201ENSMUST00000197998 747 ntBASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh8Q7TSK3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh8Q7TSK3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh8Q7TSK3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdh8Q7TSK3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh8Q7TSK3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms