Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Srsf1Q6PDM2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srsf1Q6PDM2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srsf1Q6PDM2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srsf1Q6PDM2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gm13559-201ENSMUST00000120476 863 ntBASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srsf1Q6PDM2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Ank2-226ENSMUST00000189368 339 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Gm44771-201ENSMUST00000206975 626 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Gm30025-201ENSMUST00000218555 728 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.35■□□□□ 0.21
Srsf1Q6PDM2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 AA386476-201ENSMUST00000098781 1665 ntBASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Gm33142-201ENSMUST00000193913 867 ntBASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Srsf1Q6PDM2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Srsf1Q6PDM2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Srsf1Q6PDM2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.33■□□□□ 0.2
Srsf1Q6PDM2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Srsf1Q6PDM2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Srsf1Q6PDM2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Srsf1Q6PDM2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms