Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Gm10602-201ENSMUST00000098239 609 ntBASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtl3Q6P1Y1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtl3Q6P1Y1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtl3Q6P1Y1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtl3Q6P1Y1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Gm7514-201ENSMUST00000209475 934 ntBASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rtl3Q6P1Y1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rtl3Q6P1Y1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl3Q6P1Y1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl3Q6P1Y1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl3Q6P1Y1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl3Q6P1Y1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Gm13534-201ENSMUST00000121169 513 ntBASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Rtl3Q6P1Y1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Rtl3Q6P1Y1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl3Q6P1Y1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms