Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hdac4Q6NZM9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac4Q6NZM9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac4Q6NZM9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac4Q6NZM9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac4Q6NZM9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac4Q6NZM9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac4Q6NZM9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Hdac4Q6NZM9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hdac4Q6NZM9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hdac4Q6NZM9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.13■□□□□ 0.97
Hdac4Q6NZM9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac4Q6NZM9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac4Q6NZM9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac4Q6NZM9 Gm9988-201ENSMUST00000069786 435 ntBASIC21.13■□□□□ 0.97
Hdac4Q6NZM9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms