Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ParpbpQ6IRT3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.67■□□□□ 0.42
ParpbpQ6IRT3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ParpbpQ6IRT3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
ParpbpQ6IRT3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ParpbpQ6IRT3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ParpbpQ6IRT3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ParpbpQ6IRT3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ParpbpQ6IRT3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.62■□□□□ 0.41
ParpbpQ6IRT3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms