Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ltn1Q6A009 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ltn1Q6A009 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ltn1Q6A009 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.65■■□□□ 1.22
Ltn1Q6A009 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.65■■□□□ 1.22
Ltn1Q6A009 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
Ltn1Q6A009 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
Ltn1Q6A009 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Mir5122-201ENSMUST00000175004 89 ntBASIC22.64■■□□□ 1.22
Ltn1Q6A009 Gm18666-201ENSMUST00000190039 958 ntBASIC22.64■■□□□ 1.22
Ltn1Q6A009 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.64■■□□□ 1.22
Ltn1Q6A009 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.64■■□□□ 1.22
Ltn1Q6A009 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Ltn1Q6A009 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ltn1Q6A009 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ltn1Q6A009 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ltn1Q6A009 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.61■■□□□ 1.21
Ltn1Q6A009 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.61■■□□□ 1.21
Ltn1Q6A009 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.61■■□□□ 1.21
Ltn1Q6A009 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ltn1Q6A009 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ltn1Q6A009 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.6■■□□□ 1.21
Ltn1Q6A009 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ltn1Q6A009 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Ltn1Q6A009 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ltn1Q6A009 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ltn1Q6A009 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ltn1Q6A009 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.59■■□□□ 1.21
Ltn1Q6A009 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ltn1Q6A009 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.58■■□□□ 1.21
Ltn1Q6A009 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.58■■□□□ 1.21
Ltn1Q6A009 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.58■■□□□ 1.21
Ltn1Q6A009 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.58■■□□□ 1.21
Ltn1Q6A009 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ltn1Q6A009 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ltn1Q6A009 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms