Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.12■□□□□ 0.33
AtrxQ61687 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.12■□□□□ 0.33
AtrxQ61687 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AtrxQ61687 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
AtrxQ61687 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AtrxQ61687 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 AA386476-201ENSMUST00000098781 1665 ntBASIC17.12■□□□□ 0.33
AtrxQ61687 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtrxQ61687 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.11■□□□□ 0.33
AtrxQ61687 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.11■□□□□ 0.33
AtrxQ61687 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AtrxQ61687 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
AtrxQ61687 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AtrxQ61687 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.11■□□□□ 0.33
AtrxQ61687 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtrxQ61687 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
AtrxQ61687 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.1■□□□□ 0.33
AtrxQ61687 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AtrxQ61687 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AtrxQ61687 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AtrxQ61687 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
AtrxQ61687 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AtrxQ61687 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtrxQ61687 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.09■□□□□ 0.33
AtrxQ61687 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AtrxQ61687 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AtrxQ61687 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AtrxQ61687 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.08■□□□□ 0.33
AtrxQ61687 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
AtrxQ61687 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.08■□□□□ 0.33
AtrxQ61687 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
AtrxQ61687 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.08■□□□□ 0.33
AtrxQ61687 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
AtrxQ61687 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AtrxQ61687 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AtrxQ61687 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtrxQ61687 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtrxQ61687 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.08■□□□□ 0.32
AtrxQ61687 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.08■□□□□ 0.32
AtrxQ61687 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.08■□□□□ 0.32
AtrxQ61687 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.08■□□□□ 0.32
AtrxQ61687 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtrxQ61687 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AtrxQ61687 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtrxQ61687 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.07■□□□□ 0.32
AtrxQ61687 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.07■□□□□ 0.32
AtrxQ61687 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtrxQ61687 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AtrxQ61687 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.07■□□□□ 0.32
AtrxQ61687 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AtrxQ61687 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AtrxQ61687 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
AtrxQ61687 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtrxQ61687 Gm18666-201ENSMUST00000190039 958 ntBASIC17.06■□□□□ 0.32
AtrxQ61687 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.06■□□□□ 0.32
AtrxQ61687 Gm5417-201ENSMUST00000079706 384 ntBASIC17.06■□□□□ 0.32
AtrxQ61687 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtrxQ61687 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AtrxQ61687 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms