Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Foxc1Q61572 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.78□□□□□ -0.2
Foxc1Q61572 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.78□□□□□ -0.2
Foxc1Q61572 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.78□□□□□ -0.2
Foxc1Q61572 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Foxc1Q61572 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Foxc1Q61572 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Foxc1Q61572 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Foxc1Q61572 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Gm26571-201ENSMUST00000181399 666 ntBASIC13.77□□□□□ -0.21
Foxc1Q61572 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.77□□□□□ -0.21
Foxc1Q61572 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.77□□□□□ -0.21
Foxc1Q61572 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.77□□□□□ -0.21
Foxc1Q61572 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.77□□□□□ -0.21
Foxc1Q61572 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxc1Q61572 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Foxc1Q61572 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Foxc1Q61572 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.76□□□□□ -0.21
Foxc1Q61572 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
Foxc1Q61572 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxc1Q61572 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.76□□□□□ -0.21
Foxc1Q61572 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxc1Q61572 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.75□□□□□ -0.21
Foxc1Q61572 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxc1Q61572 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Foxc1Q61572 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.74□□□□□ -0.21
Foxc1Q61572 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Foxc1Q61572 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Foxc1Q61572 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Foxc1Q61572 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Foxc1Q61572 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Foxc1Q61572 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms