Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Zic4Q61467 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zic4Q61467 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Zic4Q61467 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.32■□□□□ 0.04
Zic4Q61467 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.32■□□□□ 0.04
Zic4Q61467 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.32■□□□□ 0.04
Zic4Q61467 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zic4Q61467 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Zic4Q61467 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.31■□□□□ 0.04
Zic4Q61467 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Zic4Q61467 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.31■□□□□ 0.04
Zic4Q61467 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zic4Q61467 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Zic4Q61467 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Zic4Q61467 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Zic4Q61467 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.3■□□□□ 0.04
Zic4Q61467 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Zic4Q61467 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Zic4Q61467 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Zic4Q61467 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zic4Q61467 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Zic4Q61467 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Zic4Q61467 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.29■□□□□ 0.04
Zic4Q61467 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zic4Q61467 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Zic4Q61467 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.28■□□□□ 0.04
Zic4Q61467 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.28■□□□□ 0.04
Zic4Q61467 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Zic4Q61467 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.28■□□□□ 0.04
Zic4Q61467 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Zic4Q61467 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zic4Q61467 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zic4Q61467 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zic4Q61467 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.27■□□□□ 0.04
Zic4Q61467 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Zic4Q61467 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.27■□□□□ 0.04
Zic4Q61467 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zic4Q61467 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.27■□□□□ 0.04
Zic4Q61467 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zic4Q61467 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zic4Q61467 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zic4Q61467 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zic4Q61467 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms