Protein–RNA interactions for Protein: Q61316

Hspa4, Heat shock 70 kDa protein 4, mousemouse

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspa4Q61316 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hspa4Q61316 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hspa4Q61316 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hspa4Q61316 Serp2-204ENSMUST00000228055 705 ntBASIC20.7■□□□□ 0.9
Hspa4Q61316 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hspa4Q61316 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.7■□□□□ 0.9
Hspa4Q61316 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.7■□□□□ 0.9
Hspa4Q61316 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hspa4Q61316 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Hspa4Q61316 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Hspa4Q61316 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Hspa4Q61316 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hspa4Q61316 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.69■□□□□ 0.9
Hspa4Q61316 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hspa4Q61316 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Hspa4Q61316 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.68■□□□□ 0.9
Hspa4Q61316 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.68■□□□□ 0.9
Hspa4Q61316 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.68■□□□□ 0.9
Hspa4Q61316 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.68■□□□□ 0.9
Hspa4Q61316 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.68■□□□□ 0.9
Hspa4Q61316 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Hspa4Q61316 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hspa4Q61316 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.67■□□□□ 0.9
Hspa4Q61316 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hspa4Q61316 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hspa4Q61316 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.67■□□□□ 0.9
Hspa4Q61316 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.67■□□□□ 0.9
Hspa4Q61316 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.67■□□□□ 0.9
Hspa4Q61316 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hspa4Q61316 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hspa4Q61316 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hspa4Q61316 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.66■□□□□ 0.9
Hspa4Q61316 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hspa4Q61316 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.66■□□□□ 0.9
Hspa4Q61316 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hspa4Q61316 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hspa4Q61316 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hspa4Q61316 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hspa4Q61316 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hspa4Q61316 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.65■□□□□ 0.9
Hspa4Q61316 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hspa4Q61316 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Hspa4Q61316 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hspa4Q61316 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hspa4Q61316 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hspa4Q61316 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.64■□□□□ 0.9
Hspa4Q61316 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hspa4Q61316 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Hspa4Q61316 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hspa4Q61316 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hspa4Q61316 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hspa4Q61316 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hspa4Q61316 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms