Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Rnf43Q5NCP0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf43Q5NCP0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Rnf43Q5NCP0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf43Q5NCP0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.25■□□□□ 0.67
Rnf43Q5NCP0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf43Q5NCP0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Gm2559-201ENSMUST00000201323 363 ntBASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf43Q5NCP0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Dio3-201ENSMUST00000097228 1449 ntBASIC19.22■□□□□ 0.67
Rnf43Q5NCP0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf43Q5NCP0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf43Q5NCP0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Gm6576-201ENSMUST00000169678 883 ntBASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf43Q5NCP0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms