Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Gm6345-202ENSMUST00000180900 204 ntBASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Gm7889-201ENSMUST00000185591 958 ntBASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps13aQ5H8C4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps13aQ5H8C4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Gm23634-201ENSMUST00000175071 91 ntBASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Gm33142-201ENSMUST00000193913 867 ntBASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.96■□□□□ 0.63
Vps13aQ5H8C4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps13aQ5H8C4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Gm7461-201ENSMUST00000058918 827 ntBASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Gm11539-201ENSMUST00000119837 557 ntBASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Gm13436-201ENSMUST00000120418 567 ntBASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps13aQ5H8C4 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 Gm21814-202ENSMUST00000203277 873 ntBASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.93■□□□□ 0.62
Vps13aQ5H8C4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Gm44549-201ENSMUST00000208351 577 ntBASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps13aQ5H8C4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps13aQ5H8C4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms