Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm38205-201ENSMUST00000192243 258 ntBASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdkl5Q3UTQ8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdkl5Q3UTQ8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdkl5Q3UTQ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Cdkl5Q3UTQ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cdkl5Q3UTQ8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.88■■□□□ 1.09
Cdkl5Q3UTQ8 Gm9988-201ENSMUST00000069786 435 ntBASIC21.88■■□□□ 1.09
Cdkl5Q3UTQ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdkl5Q3UTQ8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl5Q3UTQ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 BC021767-201ENSMUST00000126387 1716 ntBASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cdkl5Q3UTQ8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdkl5Q3UTQ8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cdkl5Q3UTQ8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Cdkl5Q3UTQ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdkl5Q3UTQ8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdkl5Q3UTQ8 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.83■■□□□ 1.08
Cdkl5Q3UTQ8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Cdkl5Q3UTQ8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkl5Q3UTQ8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms