Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.6■□□□□ 0.41
Spg11Q3UHA3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Spg11Q3UHA3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.6■□□□□ 0.41
Spg11Q3UHA3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Mzt1-203ENSMUST00000227948 952 ntBASIC17.59■□□□□ 0.41
Spg11Q3UHA3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.58■□□□□ 0.41
Spg11Q3UHA3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.58■□□□□ 0.41
Spg11Q3UHA3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Spg11Q3UHA3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Spg11Q3UHA3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Spg11Q3UHA3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.58■□□□□ 0.4
Spg11Q3UHA3 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.58■□□□□ 0.4
Spg11Q3UHA3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Gm6443-201ENSMUST00000203599 874 ntBASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Spg11Q3UHA3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Spg11Q3UHA3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Gm17807-201ENSMUST00000186869 298 ntBASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.55■□□□□ 0.4
Spg11Q3UHA3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Spg11Q3UHA3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Spg11Q3UHA3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Spg11Q3UHA3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Spg11Q3UHA3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Spg11Q3UHA3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Spg11Q3UHA3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Spg11Q3UHA3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Spg11Q3UHA3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Spg11Q3UHA3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Spg11Q3UHA3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms