Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.78■□□□□ 0.44
Nkx3-2P97503 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Nkx3-2P97503 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx3-2P97503 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.77■□□□□ 0.43
Nkx3-2P97503 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx3-2P97503 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.77■□□□□ 0.43
Nkx3-2P97503 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx3-2P97503 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx3-2P97503 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Gm7290-201ENSMUST00000104990 617 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Gm12918-201ENSMUST00000120234 636 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Gm15710-201ENSMUST00000121821 636 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Gm5075-201ENSMUST00000196916 622 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.76■□□□□ 0.43
Nkx3-2P97503 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx3-2P97503 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.75■□□□□ 0.43
Nkx3-2P97503 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.75■□□□□ 0.43
Nkx3-2P97503 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.75■□□□□ 0.43
Nkx3-2P97503 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx3-2P97503 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.74■□□□□ 0.43
Nkx3-2P97503 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx3-2P97503 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.73■□□□□ 0.43
Nkx3-2P97503 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx3-2P97503 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx3-2P97503 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms