Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Smad4P97471 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.06■□□□□ 0.64
Smad4P97471 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.06■□□□□ 0.64
Smad4P97471 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smad4P97471 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smad4P97471 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.05■□□□□ 0.64
Smad4P97471 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Smad4P97471 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.05■□□□□ 0.64
Smad4P97471 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Smad4P97471 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smad4P97471 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.04■□□□□ 0.64
Smad4P97471 Gm11539-201ENSMUST00000119837 557 ntBASIC19.04■□□□□ 0.64
Smad4P97471 Gm13436-201ENSMUST00000120418 567 ntBASIC19.04■□□□□ 0.64
Smad4P97471 Gm7889-201ENSMUST00000185591 958 ntBASIC19.04■□□□□ 0.64
Smad4P97471 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smad4P97471 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smad4P97471 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smad4P97471 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smad4P97471 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.03■□□□□ 0.64
Smad4P97471 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smad4P97471 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smad4P97471 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smad4P97471 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.02■□□□□ 0.64
Smad4P97471 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.02■□□□□ 0.64
Smad4P97471 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.02■□□□□ 0.64
Smad4P97471 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.02■□□□□ 0.64
Smad4P97471 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smad4P97471 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.02■□□□□ 0.64
Smad4P97471 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smad4P97471 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Smad4P97471 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smad4P97471 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.01■□□□□ 0.63
Smad4P97471 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Smad4P97471 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.01■□□□□ 0.63
Smad4P97471 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smad4P97471 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Smad4P97471 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smad4P97471 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smad4P97471 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19■□□□□ 0.63
Smad4P97471 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Gm43183-201ENSMUST00000200632 547 ntBASIC19■□□□□ 0.63
Smad4P97471 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19■□□□□ 0.63
Smad4P97471 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19■□□□□ 0.63
Smad4P97471 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smad4P97471 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Smad4P97471 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.99■□□□□ 0.63
Smad4P97471 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms