Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.56■■□□□ 1.04
Brca1P48754 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Brca1P48754 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brca1P48754 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brca1P48754 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Brca1P48754 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Brca1P48754 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.55■■□□□ 1.04
Brca1P48754 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Brca1P48754 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Brca1P48754 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.55■■□□□ 1.04
Brca1P48754 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.55■■□□□ 1.04
Brca1P48754 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Brca1P48754 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brca1P48754 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.55■■□□□ 1.04
Brca1P48754 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.55■■□□□ 1.04
Brca1P48754 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.55■■□□□ 1.04
Brca1P48754 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.55■■□□□ 1.04
Brca1P48754 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Brca1P48754 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Brca1P48754 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.54■■□□□ 1.04
Brca1P48754 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.54■■□□□ 1.04
Brca1P48754 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.54■■□□□ 1.04
Brca1P48754 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.54■■□□□ 1.04
Brca1P48754 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brca1P48754 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Brca1P48754 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brca1P48754 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brca1P48754 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brca1P48754 Gm6433-201ENSMUST00000118634 875 ntBASIC21.52■■□□□ 1.04
Brca1P48754 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Brca1P48754 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Brca1P48754 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Brca1P48754 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brca1P48754 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brca1P48754 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Brca1P48754 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brca1P48754 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Brca1P48754 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Brca1P48754 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.5■■□□□ 1.03
Brca1P48754 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Brca1P48754 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.5■■□□□ 1.03
Brca1P48754 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Brca1P48754 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brca1P48754 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brca1P48754 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.5■■□□□ 1.03
Brca1P48754 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.5■■□□□ 1.03
Brca1P48754 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Brca1P48754 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.5■■□□□ 1.03
Brca1P48754 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.5■■□□□ 1.03
Brca1P48754 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Brca1P48754 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.5■■□□□ 1.03
Brca1P48754 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brca1P48754 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Brca1P48754 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brca1P48754 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Brca1P48754 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.49■■□□□ 1.03
Brca1P48754 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brca1P48754 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.49■■□□□ 1.03
Brca1P48754 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.49■■□□□ 1.03
Brca1P48754 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Brca1P48754 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brca1P48754 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brca1P48754 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Brca1P48754 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brca1P48754 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Brca1P48754 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.47■■□□□ 1.03
Brca1P48754 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.47■■□□□ 1.03
Brca1P48754 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brca1P48754 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Brca1P48754 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Brca1P48754 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms