Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LmnaP48678 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LmnaP48678 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LmnaP48678 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LmnaP48678 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.48■□□□□ 0.71
LmnaP48678 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LmnaP48678 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.48■□□□□ 0.71
LmnaP48678 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LmnaP48678 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.48■□□□□ 0.71
LmnaP48678 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LmnaP48678 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.48■□□□□ 0.71
LmnaP48678 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LmnaP48678 Gm13836-201ENSMUST00000121159 501 ntBASIC19.47■□□□□ 0.71
LmnaP48678 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
LmnaP48678 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LmnaP48678 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LmnaP48678 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LmnaP48678 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LmnaP48678 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LmnaP48678 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.46■□□□□ 0.71
LmnaP48678 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LmnaP48678 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LmnaP48678 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LmnaP48678 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LmnaP48678 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LmnaP48678 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LmnaP48678 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LmnaP48678 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.45■□□□□ 0.7
LmnaP48678 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.45■□□□□ 0.7
LmnaP48678 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LmnaP48678 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LmnaP48678 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
LmnaP48678 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LmnaP48678 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LmnaP48678 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.44■□□□□ 0.7
LmnaP48678 Gm20049-201ENSMUST00000219950 730 ntBASIC19.44■□□□□ 0.7
LmnaP48678 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LmnaP48678 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LmnaP48678 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.43■□□□□ 0.7
LmnaP48678 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.43■□□□□ 0.7
LmnaP48678 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LmnaP48678 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.43■□□□□ 0.7
LmnaP48678 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LmnaP48678 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
LmnaP48678 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.42■□□□□ 0.7
LmnaP48678 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.42■□□□□ 0.7
LmnaP48678 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.42■□□□□ 0.7
LmnaP48678 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LmnaP48678 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LmnaP48678 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
LmnaP48678 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LmnaP48678 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LmnaP48678 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LmnaP48678 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LmnaP48678 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
LmnaP48678 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
LmnaP48678 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
LmnaP48678 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
LmnaP48678 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms