Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GdnfP48540 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.48■□□□□ 0.23
GdnfP48540 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.48■□□□□ 0.23
GdnfP48540 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
GdnfP48540 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GdnfP48540 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GdnfP48540 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.48■□□□□ 0.23
GdnfP48540 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GdnfP48540 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
GdnfP48540 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.47■□□□□ 0.23
GdnfP48540 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
GdnfP48540 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GdnfP48540 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.47■□□□□ 0.23
GdnfP48540 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GdnfP48540 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GdnfP48540 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.46■□□□□ 0.23
GdnfP48540 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GdnfP48540 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.46■□□□□ 0.23
GdnfP48540 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GdnfP48540 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GdnfP48540 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GdnfP48540 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
GdnfP48540 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
GdnfP48540 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.45■□□□□ 0.22
GdnfP48540 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GdnfP48540 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.45■□□□□ 0.22
GdnfP48540 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.45■□□□□ 0.22
GdnfP48540 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GdnfP48540 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GdnfP48540 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.45■□□□□ 0.22
GdnfP48540 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GdnfP48540 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
GdnfP48540 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
GdnfP48540 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
GdnfP48540 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.44■□□□□ 0.22
GdnfP48540 Gm43137-201ENSMUST00000198052 594 ntBASIC16.44■□□□□ 0.22
GdnfP48540 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
GdnfP48540 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GdnfP48540 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.44■□□□□ 0.22
GdnfP48540 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GdnfP48540 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms