Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Gm37055-201ENSMUST00000191866 133 ntBASIC16.42■□□□□ 0.22
TgfaP48030 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
TgfaP48030 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TgfaP48030 Gm2399-201ENSMUST00000104944 225 ntBASIC16.41■□□□□ 0.22
TgfaP48030 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TgfaP48030 Gm10698-201ENSMUST00000182663 604 ntBASIC16.41■□□□□ 0.22
TgfaP48030 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.41■□□□□ 0.22
TgfaP48030 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TgfaP48030 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.4■□□□□ 0.22
TgfaP48030 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TgfaP48030 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Gm11643-201ENSMUST00000119578 864 ntBASIC16.39■□□□□ 0.21
TgfaP48030 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.39■□□□□ 0.21
TgfaP48030 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TgfaP48030 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.39■□□□□ 0.21
TgfaP48030 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TgfaP48030 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TgfaP48030 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TgfaP48030 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TgfaP48030 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Mir1199-201ENSMUST00000117015 119 ntBASIC16.38■□□□□ 0.21
TgfaP48030 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.38■□□□□ 0.21
TgfaP48030 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.38■□□□□ 0.21
TgfaP48030 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.38■□□□□ 0.21
TgfaP48030 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TgfaP48030 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TgfaP48030 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.38■□□□□ 0.21
TgfaP48030 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TgfaP48030 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.38■□□□□ 0.21
TgfaP48030 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.37■□□□□ 0.21
TgfaP48030 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Gm13158-201ENSMUST00000122007 736 ntBASIC16.37■□□□□ 0.21
TgfaP48030 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TgfaP48030 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TgfaP48030 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TgfaP48030 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.37■□□□□ 0.21
TgfaP48030 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TgfaP48030 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.36■□□□□ 0.21
TgfaP48030 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.36■□□□□ 0.21
TgfaP48030 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.36■□□□□ 0.21
TgfaP48030 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.36■□□□□ 0.21
TgfaP48030 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms