Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Gm26524-201ENSMUST00000192339 390 ntBASIC17.87■□□□□ 0.45
Nkx2-6P43688 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Nkx2-6P43688 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-6P43688 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.86■□□□□ 0.45
Nkx2-6P43688 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nkx2-6P43688 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.85■□□□□ 0.45
Nkx2-6P43688 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.85■□□□□ 0.45
Nkx2-6P43688 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-6P43688 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-6P43688 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-6P43688 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nkx2-6P43688 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Gm22240-201ENSMUST00000175225 82 ntBASIC17.83■□□□□ 0.44
Nkx2-6P43688 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-6P43688 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-6P43688 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nkx2-6P43688 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.82■□□□□ 0.44
Nkx2-6P43688 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.82■□□□□ 0.44
Nkx2-6P43688 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms