Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.45■□□□□ 0.7
Msh2P43247 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh2P43247 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh2P43247 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Msh2P43247 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
Msh2P43247 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.44■□□□□ 0.7
Msh2P43247 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Msh2P43247 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh2P43247 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Msh2P43247 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh2P43247 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.43■□□□□ 0.7
Msh2P43247 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Msh2P43247 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.43■□□□□ 0.7
Msh2P43247 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Msh2P43247 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh2P43247 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.42■□□□□ 0.7
Msh2P43247 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Msh2P43247 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.42■□□□□ 0.7
Msh2P43247 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh2P43247 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Msh2P43247 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Msh2P43247 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.41■□□□□ 0.7
Msh2P43247 Gm43173-201ENSMUST00000202246 593 ntBASIC19.41■□□□□ 0.7
Msh2P43247 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Msh2P43247 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.41■□□□□ 0.7
Msh2P43247 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.41■□□□□ 0.7
Msh2P43247 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh2P43247 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msh2P43247 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Msh2P43247 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh2P43247 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Msh2P43247 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Msh2P43247 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Msh2P43247 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msh2P43247 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.39■□□□□ 0.69
Msh2P43247 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msh2P43247 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Msh2P43247 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Msh2P43247 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 AA386476-201ENSMUST00000098781 1665 ntBASIC19.39■□□□□ 0.69
Msh2P43247 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Msh2P43247 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Msh2P43247 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh2P43247 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms