Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccl3P10855 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl3P10855 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccl3P10855 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.77■□□□□ 0.28
Ccl3P10855 Gm18666-201ENSMUST00000190039 958 ntBASIC16.77■□□□□ 0.28
Ccl3P10855 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl3P10855 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl3P10855 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ccl3P10855 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.77■□□□□ 0.27
Ccl3P10855 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl3P10855 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl3P10855 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.77■□□□□ 0.27
Ccl3P10855 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl3P10855 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Ccl3P10855 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccl3P10855 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccl3P10855 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl3P10855 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.76■□□□□ 0.27
Ccl3P10855 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.76■□□□□ 0.27
Ccl3P10855 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Ccl3P10855 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccl3P10855 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccl3P10855 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Gm2399-201ENSMUST00000104944 225 ntBASIC16.75■□□□□ 0.27
Ccl3P10855 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.75■□□□□ 0.27
Ccl3P10855 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccl3P10855 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccl3P10855 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccl3P10855 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl3P10855 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ccl3P10855 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.74■□□□□ 0.27
Ccl3P10855 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccl3P10855 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.74■□□□□ 0.27
Ccl3P10855 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.74■□□□□ 0.27
Ccl3P10855 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.74■□□□□ 0.27
Ccl3P10855 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccl3P10855 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl3P10855 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccl3P10855 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Gm715-201ENSMUST00000117865 831 ntBASIC16.73■□□□□ 0.27
Ccl3P10855 Gm10698-201ENSMUST00000182663 604 ntBASIC16.73■□□□□ 0.27
Ccl3P10855 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccl3P10855 Gm7977-201ENSMUST00000193787 748 ntBASIC16.73■□□□□ 0.27
Ccl3P10855 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.73■□□□□ 0.27
Ccl3P10855 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Ccl3P10855 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccl3P10855 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccl3P10855 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl3P10855 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccl3P10855 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.72■□□□□ 0.27
Ccl3P10855 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ccl3P10855 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccl3P10855 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccl3P10855 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl3P10855 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccl3P10855 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccl3P10855 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Gm13836-201ENSMUST00000121159 501 ntBASIC16.71■□□□□ 0.27
Ccl3P10855 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms