Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cops3O88543 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cops3O88543 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cops3O88543 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cops3O88543 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.86■□□□□ 0.29
Cops3O88543 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops3O88543 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cops3O88543 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cops3O88543 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cops3O88543 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cops3O88543 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cops3O88543 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cops3O88543 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cops3O88543 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops3O88543 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.84■□□□□ 0.29
Cops3O88543 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.84■□□□□ 0.29
Cops3O88543 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops3O88543 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.83■□□□□ 0.29
Cops3O88543 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cops3O88543 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cops3O88543 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.83■□□□□ 0.28
Cops3O88543 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cops3O88543 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.83■□□□□ 0.28
Cops3O88543 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cops3O88543 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops3O88543 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops3O88543 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cops3O88543 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Cops3O88543 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.82■□□□□ 0.28
Cops3O88543 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.82■□□□□ 0.28
Cops3O88543 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.82■□□□□ 0.28
Cops3O88543 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Cops3O88543 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cops3O88543 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops3O88543 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.81■□□□□ 0.28
Cops3O88543 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.81■□□□□ 0.28
Cops3O88543 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops3O88543 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cops3O88543 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cops3O88543 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops3O88543 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cops3O88543 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms