Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Gm37055-201ENSMUST00000191866 133 ntBASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.29■■□□□ 1
B020004C17RikJ3QP07 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.28■■□□□ 1
B020004C17RikJ3QP07 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Gm15565-201ENSMUST00000118890 427 ntBASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
B020004C17RikJ3QP07 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
B020004C17RikJ3QP07 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
B020004C17RikJ3QP07 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
B020004C17RikJ3QP07 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
B020004C17RikJ3QP07 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
B020004C17RikJ3QP07 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Gm11643-201ENSMUST00000119578 864 ntBASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Flg-201ENSMUST00000050758 1488 ntBASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
B020004C17RikJ3QP07 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
B020004C17RikJ3QP07 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.22■□□□□ 0.99
B020004C17RikJ3QP07 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms