Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh17E9PXF0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh17E9PXF0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh17E9PXF0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh17E9PXF0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh17E9PXF0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh17E9PXF0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Gm6211-202ENSMUST00000167849 925 ntBASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh17E9PXF0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh17E9PXF0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Gm5408-201ENSMUST00000197998 747 ntBASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdh17E9PXF0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdh17E9PXF0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms