Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.07■□□□□ 0.96
Krt28A6BLY7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt28A6BLY7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Krt28A6BLY7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt28A6BLY7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.05■□□□□ 0.96
Krt28A6BLY7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Gm21362-201ENSMUST00000194272 928 ntBASIC21.05■□□□□ 0.96
Krt28A6BLY7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.05■□□□□ 0.96
Krt28A6BLY7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt28A6BLY7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt28A6BLY7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt28A6BLY7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Krt28A6BLY7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Krt28A6BLY7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt28A6BLY7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt28A6BLY7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt28A6BLY7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt28A6BLY7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.02■□□□□ 0.96
Krt28A6BLY7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Krt28A6BLY7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Krt28A6BLY7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Krt28A6BLY7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Krt28A6BLY7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Krt28A6BLY7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21■□□□□ 0.95
Krt28A6BLY7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21■□□□□ 0.95
Krt28A6BLY7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Krt28A6BLY7 Gm10819-201ENSMUST00000099988 561 ntBASIC21■□□□□ 0.95
Krt28A6BLY7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt28A6BLY7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.99■□□□□ 0.95
Krt28A6BLY7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.99■□□□□ 0.95
Krt28A6BLY7 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.99■□□□□ 0.95
Krt28A6BLY7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt28A6BLY7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms