Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm37856-201ENSMUST00000191634 999 ntBASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-42A0A0A6YY38 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-42A0A0A6YY38 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-42A0A0A6YY38 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-42A0A0A6YY38 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm13168-201ENSMUST00000121771 632 ntBASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Trmt13-210ENSMUST00000198454 880 ntBASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-42A0A0A6YY38 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-42A0A0A6YY38 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-42A0A0A6YY38 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms