Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6n-6A0A075B6B2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Gm43530-201ENSMUST00000195920 274 ntBASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6n-6A0A075B6B2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6n-6A0A075B6B2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6n-6A0A075B6B2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6n-6A0A075B6B2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Gm6802-201ENSMUST00000167843 1983 ntBASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6n-6A0A075B6B2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6n-6A0A075B6B2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6n-6A0A075B6B2 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms