Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Gm9847-201ENSMUST00000052528 599 ntBASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.1■□□□□ 0.17
Rbfox1Q9JJ43 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.09■□□□□ 0.17
Rbfox1Q9JJ43 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rbfox1Q9JJ43 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Rbfox1Q9JJ43 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rbfox1Q9JJ43 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rbfox1Q9JJ43 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rbfox1Q9JJ43 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rbfox1Q9JJ43 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbfox1Q9JJ43 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rbfox1Q9JJ43 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms