Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpxQ9JHS4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClpxQ9JHS4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpxQ9JHS4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpxQ9JHS4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpxQ9JHS4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClpxQ9JHS4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ClpxQ9JHS4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Gm12821-201ENSMUST00000120022 600 ntBASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Gm21956-201ENSMUST00000179946 522 ntBASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClpxQ9JHS4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClpxQ9JHS4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Gm43530-201ENSMUST00000195920 274 ntBASIC17.24■□□□□ 0.35
ClpxQ9JHS4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.24■□□□□ 0.35
ClpxQ9JHS4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClpxQ9JHS4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ClpxQ9JHS4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.22■□□□□ 0.35
ClpxQ9JHS4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 AA386476-201ENSMUST00000098781 1665 ntBASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClpxQ9JHS4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms