Protein–RNA interactions for Protein: Q9ESC8

Aff4, AF4/FMR2 family member 4, mousemouse

Predictions only

Length 1,160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff4Q9ESC8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Aff4Q9ESC8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Aff4Q9ESC8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Aff4Q9ESC8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Aff4Q9ESC8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aff4Q9ESC8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aff4Q9ESC8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aff4Q9ESC8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aff4Q9ESC8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aff4Q9ESC8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aff4Q9ESC8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Aff4Q9ESC8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Aff4Q9ESC8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aff4Q9ESC8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aff4Q9ESC8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms