Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Gm40848-201ENSMUST00000221998 324 ntBASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a3bpQ9EQG9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Gm18284-201ENSMUST00000172604 624 ntBASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Gm43060-201ENSMUST00000200621 289 ntBASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a3bpQ9EQG9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.72■■□□□ 1.07
Col4a3bpQ9EQG9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a3bpQ9EQG9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Col4a3bpQ9EQG9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Col4a3bpQ9EQG9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col4a3bpQ9EQG9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Gm8495-201ENSMUST00000188740 694 ntBASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col4a3bpQ9EQG9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col4a3bpQ9EQG9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col4a3bpQ9EQG9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col4a3bpQ9EQG9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a3bpQ9EQG9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Col4a3bpQ9EQG9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms