Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upf1Q9EPU0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upf1Q9EPU0 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Upf1Q9EPU0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.85■■□□□ 1.09
Upf1Q9EPU0 AA386476-201ENSMUST00000098781 1665 ntBASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.85■■□□□ 1.09
Upf1Q9EPU0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Gm25016-201ENSMUST00000158399 131 ntBASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Upf1Q9EPU0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.83■■□□□ 1.09
Upf1Q9EPU0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Upf1Q9EPU0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Upf1Q9EPU0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Upf1Q9EPU0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upf1Q9EPU0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upf1Q9EPU0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upf1Q9EPU0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Upf1Q9EPU0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Upf1Q9EPU0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Gm27704-201ENSMUST00000185094 107 ntBASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Mzt1-203ENSMUST00000227948 952 ntBASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upf1Q9EPU0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Upf1Q9EPU0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Upf1Q9EPU0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.76■■□□□ 1.07
Upf1Q9EPU0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms