Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.17■□□□□ 0.5
Khdc3Q9CWU5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Khdc3Q9CWU5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Gm27801-201ENSMUST00000184174 223 ntBASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc3Q9CWU5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc3Q9CWU5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Gm43060-201ENSMUST00000200621 289 ntBASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc3Q9CWU5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Khdc3Q9CWU5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc3Q9CWU5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms