Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh15Q99PJ1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh15Q99PJ1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh15Q99PJ1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh15Q99PJ1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh15Q99PJ1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh15Q99PJ1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh15Q99PJ1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Gm21814-202ENSMUST00000203277 873 ntBASIC21.88■■□□□ 1.09
Pcdh15Q99PJ1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh15Q99PJ1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.87■■□□□ 1.09
Pcdh15Q99PJ1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh15Q99PJ1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh15Q99PJ1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh15Q99PJ1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh15Q99PJ1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Pcdh15Q99PJ1 Gm6659-201ENSMUST00000174752 547 ntBASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh15Q99PJ1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh15Q99PJ1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh15Q99PJ1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh15Q99PJ1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh15Q99PJ1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Gm7367-201ENSMUST00000057611 492 ntBASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh15Q99PJ1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms