Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh23Q99PF4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.61■□□□□ 0.73
Cdh23Q99PF4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdh23Q99PF4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh23Q99PF4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh23Q99PF4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.59■□□□□ 0.73
Cdh23Q99PF4 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.58■□□□□ 0.73
Cdh23Q99PF4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.58■□□□□ 0.73
Cdh23Q99PF4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh23Q99PF4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh23Q99PF4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh23Q99PF4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cdh23Q99PF4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.58■□□□□ 0.72
Cdh23Q99PF4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh23Q99PF4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh23Q99PF4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh23Q99PF4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Gm13559-201ENSMUST00000120476 863 ntBASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Gm44549-201ENSMUST00000208351 577 ntBASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.56■□□□□ 0.72
Cdh23Q99PF4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh23Q99PF4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Gm17971-201ENSMUST00000190239 806 ntBASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh23Q99PF4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh23Q99PF4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms