Protein–RNA interactions for Protein: Q91ZQ5

Rpe65, Retinoid isomerohydrolase, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpe65Q91ZQ5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpe65Q91ZQ5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpe65Q91ZQ5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Nespas-201ENSMUST00000143738 1083 ntBASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Gm10602-201ENSMUST00000098239 609 ntBASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpe65Q91ZQ5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpe65Q91ZQ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpe65Q91ZQ5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpe65Q91ZQ5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpe65Q91ZQ5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpe65Q91ZQ5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.53
Rpe65Q91ZQ5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Rpe65Q91ZQ5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Gm6365-201ENSMUST00000054711 744 ntBASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpe65Q91ZQ5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Mir5133-201ENSMUST00000174955 77 ntBASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpe65Q91ZQ5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms