Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb20Q91XZ9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Gm45251-201ENSMUST00000209486 1465 ntBASIC18.19■□□□□ 0.5
Pcdhb20Q91XZ9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Gm44044-201ENSMUST00000205178 1089 ntBASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb20Q91XZ9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Gm18515-201ENSMUST00000219755 797 ntBASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb20Q91XZ9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb20Q91XZ9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Gm12106-201ENSMUST00000116006 1200 ntBASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Gm37319-201ENSMUST00000193500 636 ntBASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb20Q91XZ9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb20Q91XZ9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb20Q91XZ9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb20Q91XZ9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb20Q91XZ9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb20Q91XZ9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb20Q91XZ9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb20Q91XZ9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms