Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb1Q91XX8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhgb1Q91XX8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb1Q91XX8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Gm27011-201ENSMUST00000182352 972 ntBASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb1Q91XX8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhgb1Q91XX8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb1Q91XX8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb1Q91XX8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb1Q91XX8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms