Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Gm11927-201ENSMUST00000118472 759 ntBASIC23.1■■□□□ 1.29
StrcQ8VIM6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
StrcQ8VIM6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
StrcQ8VIM6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
StrcQ8VIM6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
StrcQ8VIM6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.08■■□□□ 1.28
StrcQ8VIM6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
StrcQ8VIM6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
StrcQ8VIM6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
StrcQ8VIM6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.07■■□□□ 1.28
StrcQ8VIM6 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.07■■□□□ 1.28
StrcQ8VIM6 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.07■■□□□ 1.28
StrcQ8VIM6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
StrcQ8VIM6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
StrcQ8VIM6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
StrcQ8VIM6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.06■■□□□ 1.28
StrcQ8VIM6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC23.05■■□□□ 1.28
StrcQ8VIM6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
StrcQ8VIM6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.04■■□□□ 1.28
StrcQ8VIM6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
StrcQ8VIM6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
StrcQ8VIM6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
StrcQ8VIM6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
StrcQ8VIM6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
StrcQ8VIM6 Gm21814-202ENSMUST00000203277 873 ntBASIC23.02■■□□□ 1.28
StrcQ8VIM6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.02■■□□□ 1.28
StrcQ8VIM6 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.02■■□□□ 1.28
StrcQ8VIM6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
StrcQ8VIM6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
StrcQ8VIM6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
StrcQ8VIM6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23■■□□□ 1.27
StrcQ8VIM6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
StrcQ8VIM6 Gm20100-201ENSMUST00000209418 2272 ntBASIC23■■□□□ 1.27
StrcQ8VIM6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
StrcQ8VIM6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23■■□□□ 1.27
StrcQ8VIM6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
StrcQ8VIM6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23■■□□□ 1.27
StrcQ8VIM6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
StrcQ8VIM6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
StrcQ8VIM6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
StrcQ8VIM6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms