Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.86■□□□□ 0.29
Odf4Q8VI88 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.86■□□□□ 0.29
Odf4Q8VI88 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Odf4Q8VI88 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.85■□□□□ 0.29
Odf4Q8VI88 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Odf4Q8VI88 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.84■□□□□ 0.29
Odf4Q8VI88 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Odf4Q8VI88 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Odf4Q8VI88 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Odf4Q8VI88 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.83■□□□□ 0.29
Odf4Q8VI88 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Odf4Q8VI88 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Smad6-203ENSMUST00000179458 273 ntBASIC16.83■□□□□ 0.28
Odf4Q8VI88 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.83■□□□□ 0.28
Odf4Q8VI88 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Odf4Q8VI88 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.82■□□□□ 0.28
Odf4Q8VI88 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.82■□□□□ 0.28
Odf4Q8VI88 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.82■□□□□ 0.28
Odf4Q8VI88 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Gm10493-201ENSMUST00000097270 612 ntBASIC16.82■□□□□ 0.28
Odf4Q8VI88 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.82■□□□□ 0.28
Odf4Q8VI88 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Odf4Q8VI88 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.81■□□□□ 0.28
Odf4Q8VI88 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms