Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nkd2Q8VE28 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkd2Q8VE28 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkd2Q8VE28 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkd2Q8VE28 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Nkd2Q8VE28 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.34
Nkd2Q8VE28 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nkd2Q8VE28 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkd2Q8VE28 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkd2Q8VE28 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Gm12933-201ENSMUST00000120203 872 ntBASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms